Better Business Bill Pay Starts Here.

Checkrun is the most secure, convenient, and cost-effective way to pay from QuickBooks® Online. Real-time check approval and signing right from your phone. You can manage multiple accounts at once, and the power of Positive Pay is built-in to protect your check payments from fraud.

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Watch How Checkrun Can improve Your Payment Processes!

Boost efficiency with AP on one, secure platform

Take control of your back office with time-saving automation, online check printing, and remote access. Gain internal processing efficiencies, pay bills faster and reduce trips to your bank. Checkrun is the most secure, convenient, and cost-effective way to streamline the Accounts Payable process from one platform.

Streamline the AP process

Increase efficiency and save time when you automate payments—from automatic sync with QuickBooks Online to auto-remittance advice.

Simplify payment approvals

Use custom rules to automate, route, and customize approvals to the right team member at the right time. Approve and pay bills faster, with fewer resources.

Manage payments on-the-go

The Checkrun Mobile Approval App gives the freedom to manage, approve, sign and pay vendors from anywhere, at any time. 

Speed. Security. Scalability. This is bill pay made easy.

Take control of your back office with time-saving automation, online check printing, and remote access. Improve cash flow, pay bills faster, and get more done — all with Checkrun.

Simplify AP with a cloud-based system

Tasks like getting payments approved and signed, toggling between programs and accounts, or spending hours preparing audit reports shouldn’t hold your team back. We’ve built a powerful, easy and secure solution that helps businesses like you, start, grow and scale your back office.

Gain greater control with automated approvals – anywhere

Easily set up user roles to route and customize approvals to the right team member at the right time. See all payment activity at a glance through the Checkrun dashboard or Mobile App.

Expand the way you pay with flexible payment options

Pay every business expense online. Choose to make payment by ACH bank transfer, or by paper check. Your vendor doesn’t need to sign up in order to receive secure payments and ensure remittance. 

Stay in sync with QuickBooks Online

Our two-way sync keeps your QuickBooks Online account up-to-date and reduces the time spent on manual, tedious tasks related to bill processing. 

Manage payables with ease and streamline approvals
See a complete audit trail for every payment, at every step
Eliminate dual data entry hassles and errors

Manage every payment on-the-go

Eliminate the tedious paperwork and chasing ink-on-paper signatures and approvals. Enjoy the freedom of remote accounts payable management – approve and sign checks anytime, anywhere, from any device.

Checkrun Mobile App

Enjoy powerful features that support your back office.

You have more important things to focus on. Let Checkrun take the stress of managing business bills off your shoulders. Streamline the entire payment process, from payment approval to disbursement.

Bill Pay portal

 Powerful payment capabilities with easy-to-use dashboard designed to cut bill pay by costs 50%.

Approval workflows

Set up automated approval workflows and custom user roles to fit with your business needs.

Payment flexibility

Easily pay vendors by ACH or check with Checkrun. Your vendor doesn’t need to sign up to receive fast, secure payments.

Remittance data

All payment-related activity is automatically logged and attached to each payment for easy reference and to ensure remittance.

Check printing

Print checks at home or office – pre-prints and blank check stock supported. All you need is Checkrun and a printer.

Print and Mail Service

Automate the mailing of checks to vendors by letting Checkrun print, stamp, and mail them for you.


Easily set up notifications (via email or phone) by user role to ensure you never miss a payment and stay on top of each payment status.

Vendor management

Manage vendors with ease, deciding how you pay and keeping and eye on payment-related reporting for each vendor.

Better business bill pay starts here.

Use Checkrun to manage and pay vendors by ACH or paper checks
— from one, secure platform. You choose.

Pay vendors by check

Handle check payments seamlessly – without the hassle of manual processes. Carry out your payments with ease and speed. Process your payments faster and get the flexibility to make check payments from anywhere.

Pay vendors by ACH

Easily send business payments and echecks, online. Checkrun provides the simplest way to set up your account vailidation process for ACH. Manage & track all your outgoing payments and bills in one place.


A Plan For Every Business

Designed to fit the needs of your business, at prices that won’t break the bank.

Annual Plan


Ideal for businesses looking to minimize time while maximizing cash flow. Pay upfront and save 25% annually.

Monthly Plan


Perfect for small businesses with a growing number of finance tasks and bills. 

Don’t just take it from us. 

“This software was the critical tool that allowed me to make check payments when geographically separated from the company’s bookkeeper. This tool provided all the necessary resources to effectively manage this part of the business.”

Clinton R. 

Real Estate Management

“We all work remotely and Checkrun has a mobile app so we can approve and sign payments right from the app. The signature shows up on the check and the app keeps track of all workflow steps so we never miss a payment. They also have a print and mail service or you can print checks out yourself. It is a nice app that works for us.”

Kimberly G. 

Senior Team Executive

“I’m a bookkeeper and I manage several clients. Checkrun has been a huge timesaver for me. My clients can approve and sign payments remotely from their phones without me visiting their remote locations. Setup was fast and easy.”

Bill F. 

Freelance Bookkeeper

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Join the hundreds of businesses choosing Checkrun to simplify accounts payable and business bill pay.

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