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Making ACH payments easy, for everyone.

As your small business grows, you need tools to help streamline operations. Automated Clearing House (ACH) can help you digitize vendor payments, saving time and resources.

Easy business payments

Why pay with ACH?

More and more businesses are switching to ACH payments because they are faster and easier to handle compared to paying by check or credit card.

Make faster payments.

Average ACH processing time is 2–7 days, from initiation to delivery. This gives businesses more flexibility and control over cash flows.

Reduce check fraud.

You will reduce the risk of check fraud and keep your banking information safe by paying with digital payments. ACH is secure, reliable, and always includes remittance data.

Drive down costs.

More companies are transitioning to ACH payments because of reduced costs and greater convenience. 

A modern approach to ACH payments with Checkrun.

Simplify accounts payables and make it easier for your vendors to reconcile their accounts receivables, too. Pay every business expense online with confidence. You can opt to make payments by ACH bank transfer, or by paper check– it’s your choice! And, your vendors don’t even need to sign up for Checkrun in order to receive secure payments and access remittance information.

Make instant payments.

Pay your vendors online, straight to their bank account, and reduce trips to the bank. ACH payments process faster than checks so you can hold onto your cash longer. Vendor only accepts checks? No problem. Print and mail business checks online or we’ll send them on your behalf, the same-day.

Make faster payments with Checkrun

Paperless bill payments and remittance advice.

Pay electronically and easily send your vendors the remittance advice needed to reconcile their payments. Electronic remittances make your vendors’ lives a little bit easier by letting them know that payments have been made and when to expect the payments. Checkrun increases your productivity by automating repetitive tasks-so you can focus on more important ones.

Ensure remittance on all ACH payments with checkrun

Be confident in your approval process.

Ensure the right team members can easily review and approve bills without slowing down your process. Gain complete visibility into every payment and track payments from initiation, approval, and completion to reconciliation with Checkrun’s easy-to-use dashboard and mobile app. 

quickbooks online integration

Improve the entire accounts payable process.

Checkrun streamlines accounts payable, freeing you from manual processes and improving the way your business operates. Whether you are at the office or on the go, Checkrun’s bill pay platform and Mobile Approval App replaces the manual process of paying bills and chasing incoming payments.

pay vendors by ach

QuickBooks Online integration that makes your life easier.

Checkrun seamlessly integrates with your QuickBooks Online account, powering it up with real-time, two-way sync to help you simplify bill pay and manage your bookkeeping workflow. Reduce dual data entry, speed up payment approval and disbursement and simplify every step of your payables workflow.

Checkrun and QuickBooks Online integration

Checkrun makes it easy to pay by ACH. 

Easily process business payments and echecks, online. Checkrun provides the simplest way to set up your account for ACH. Manage & track all your outgoing payments and bills in one place.

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Zero integration: Your vendor doesn't need to sign up to receive payments
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Sync with QuickBooks Online: All relevant information is automatically synced with Checkrun, simplifying your bill pay
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Ensure remittance: all of the remittance data needed to reconcile the payment can be sent electronically to your vendors
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Made for businesses: Powerful payment capabilities with easy-to-use dashboard designed to cut bill pay by 50%

Enjoy powerful features that support your back office.

You have more important things to focus on. Let Checkrun take the stress of managing business bills off your shoulders. Streamline the entire payment process, from payment approval to disbursement.

Bill pay portal

For every payment created in Checkrun, your vendors will receive a secure link and pincode to access complete remittance advice.

Anytime, anywhere payments

Process all of your bills and payments online or with our Mobile App. Track your expenses, approve and pay bills on the fly and get real time visibility across all business accounts, from any device. 

Notifications

Easily set up notifications (via email or phone) by user role to ensure you never miss a payment and stay on top of each payment status.

Still pay by paper check? You can with Checkrun.

Eliminate tedious paperwork and chasing ink-on-paper signatures and approvals. Easily approve, sign, print, and mail paper checks anytime, from any device.

Check printing solutions

Print checks at home or office – pre-prints and blank check stock supported. All you need is Checkrun and a printer. Learn more.

Same-Day Print and Mail

Automate the mailing of checks to vendors by letting Checkrun print, stamp, and mail them for you. Learn more.

Frequently Asked Questions

Still need help? Feel free to reach out to us via email, chat, or phone. In the meantime, please view our help desk.

How long does it take to fund, process and pay via ACH?

Checkrun processes ACH payments within 5 business days. All status updates and error handling is done within Checkrun so you can stay on top of every payment.

What is the cost of an ACH Transmission?

Checkrun charges the nominal fee of $.50 per ACH transaction. Your vendor will receive an email or push notification (if mobile phone number is provided) with a link to the Remittance Portal where they can access the details on the payment.

Do I need to have a special membership type to process ACH payments?

Checkrun offers ACH payment types in our Checkrun Monthly and Checkrun Annual Memberships. Electronic Payments are not supported in our Checkrun FLEX membership.

How many bank accounts can I set up with ACH Payments?

Checkrun doesn’t limit the number of bank accounts that can be used to create payments, however with ACH the limit is one bank account.

What are the daily limits for ACH payments?

The daily limits to pay via ACH are:

  • Number of payments: unlimited
  • Daily batch limit: $50,000
  • Single payment limit: $25,000

How do I provide remittance advice to my vendors being paid by ACH?

Checkrun introduces a new Bill Remittance Portal (Payee Portal) for vendors/payees to gain access to the remittance advice for the ACH Payment. If you have included an email address in the vendor record, we will use that to send one email, with link, to the Payee Portal and a second email with a unique pin code. Remittance Advices can be sent from the Archive Payment Queue and will be automatically sent back to QuickBooks Online.

Trust is important to us!

"This software was the critical tool that allowed me to make check payments when geographically separated from the company's bookkeeper. This tool provided all the necessary resources to effectively manage this part of the business."

Clinton R.

Real Estate Management

"We all work remotely and Checkrun has a mobile app so we can approve and sign payments right from the app. The signature shows up on the check and the app keeps track of all workflow steps so we never miss a payment. They also have a print and mail service or you can print checks out yourself. It is a nice app that works for us."

Kimberly G.

Education Management

“I’m a bookkeeper and I manage several clients. Checkrun has been a huge timesaver for me. My clients can approve and sign payments remotely from their phones without me visiting their remote locations. Setup was fast and easy."

Bill F.

Freelance Bookkeeper

Join the Checkrun Beta ACH and Bill Pay Program!