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A complete check payment processing solution for nonprofits.

Powerful, simple, and secure. Checkrun gives you the tools and intelligence to automate the entire check payment process from any device and take your nonprofit to the next level.

Easy-to-use payment dashboard
Mobile check approval app
Cash management and control
Added payment security
Checkrun Payments

A powerful
payment processing solution
to support your cause

Checkrun’s simple and secure, nonprofit payment processing solution saves you time managing your payment approvals, so you can spend more time helping the community.


Charities & nonprofits

Religious institutions

School & organizations


Centralize your controls

Create automated workflows with multi-step approvals based on amounts, vendors, approvers, and more. Custom workflows and role management capabilities help tighten your internal controls and ensure the proper procedures are in place for your nonprofit organization. Checkrun helps you establish continuous reliability and security for your financial data. 



Simple and easy payment solution

Transparency is essential for securing and keeping donors and sponsors on board. With Checkrun, you can quickly see and know what’s happening across your nonprofit organization in one easy-to-use dashboard and mobile app. Your payment data is drawn directly from your bank account, eliminating double data entry, prefunding and ultimately – saving you time to focus on your mission.


Stay connected remotely

Checkrun is cloud-based and a mobile app, so you can update your nonprofit’s accounting data anywhere, anytime. Avoid cash flow problems for your organization, by staying ahead of unpaid and overdue invoices from the mobile approval app. You can even approve and sign checks right from your phone. 

Checkrun Payments


Protect your organization’s payments

Protect your organization and your donors with industry-leading fraud prevention tools. Checkrun backs up your payment data and protects it with multiple layers of security including positive pay. With enhanced security and two-factor authentication you’ll add a level of protection against unauthorized or fraudulent payments. 

Payments that really matter

Our mission is to help yours

With features like payment approval reminders, same-day print and mail, and remote check signing, you can invest more time making a difference and less on your nonprofit’s accounts payable solution.

QBO integration

Automatically pull in data from your QuickBooks Online account, as you eliminate manual work, double data entry and free up time for strategic planning.

Checkrun dashboard

Easily track your check approvals and upcoming payments in one convenient place. Plus, access workflows, user roles and fraud prevention reports like positive pay directly from the cloud-based app.

Mobile approval app

Manage, approve and sign your organization’s check payments while you’re on-the-go with the Checkrun mobile approval app.

Fraud protection

Protect your organization and your donors with industry-leading check fraud prevention tools. Positive pay and 15+ advanced security features built directly into Checkrun to defend against fraudulent threats.

Visibility & control

Centralize all your payment data into one unified system with rigorous controls, and built-in tracking. Access archive check images straight from QBO for historical access and audit trails.

Print and mail service

Checkrun’s same-day print and mail service utilizes our TruPrint blank check stock, making it easy and affordable to print and mail professional and secure checks for your organization.

An accounts payable solution that gives back

Save 10% on Checkrun for registered nonprofit organizations.

Sign up below for a 15-day free trial and annual business subscription. At the end of your free trial, your 10% discount will be automatically applied.

This offer is only available to registered nonprofit organizations. After signup, contact us at [email protected] with your proof of status and charity number to receive the discount.

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Checkrun is a better
way to pay.

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Let’s Talk.

Have a question about Checkrun or want to learn more about our plan options? We can help. Chat with us now, complete the form, or give us a call.

1-833-CHCK-RUN (1-833-242-5786)

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